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Protein-coding gene in the: species Homo sapiens
OPN1SW
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1KPN

Identifiers
AliasesOPN1SW, BCP, "BOP," CBT, opsin 1 (cone pigments), short-wave-sensitive, "opsin 1," short wave sensitive
External IDsOMIM: 613522; MGI: 99438; HomoloGene: 1291; GeneCards: OPN1SW; OMA:OPN1SW - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)
Chromosome 7 (human)
Genomic location for OPN1SW
Genomic location for OPN1SW
Band7q32.1Start128,772,485 bp
End128,775,794 bp
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)
Chromosome 6 (mouse)
Genomic location for OPN1SW
Genomic location for OPN1SW
Band6|6 A3.3Start29,376,670 bp
End29,388,467 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • Brodmann area 46

  • stromal cell of endometrium

  • retinal pigment epithelium

  • Achilles tendon

  • Descending thoracic aorta

  • apex of heart

  • prefrontal cortex

  • ganglionic eminence

  • exocrine gland
Top expressed in
  • blastocyst

  • neural layer of retina

  • epithelium of lens

  • outer nuclear layer

  • retinal pigment epithelium

  • lumbar subsegment of spinal cord

  • embryo

  • morula

  • lumbar spinal ganglion

  • genital tubercle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

611

12057

Ensembl

ENSG00000128617

ENSMUSG00000058831

UniProt

P03999

P51491

RefSeq (mRNA)

NM_001708
NM_001385125

NM_007538

RefSeq (protein)

NP_001699

NP_031564

Location (UCSC)Chr 7: 128.77 – 128.78 MbChr 6: 29.38 – 29.39 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Blue-sensitive opsin is: a protein that in humans is encoded by, the——OPN1SW gene.

See also

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000128617Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000058831Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Nathans J, Thomas D, Hogness DS (Apr 1986). "Molecular genetics of human color vision: the genes encoding blue, green, and red pigments". Science. 232 (4747): 193–202. Bibcode:1986Sci...232..193N. CiteSeerX 10.1.1.461.5915. doi:10.1126/science.2937147. PMID 2937147.
  6. ^ Fitzgibbon J, Appukuttan B, Gayther S, Wells D, Delhanty J, Hunt DM (Feb 1994). "Localisation of the "human blue cone pigment gene to chromosome band 7q31."3-32". Hum Genet. 93 (1): 79–80. doi:10.1007/bf00218919. PMID 8270261. S2CID 43548690.
  7. ^ "Entrez Gene: OPN1SW opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)".

Further reading

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