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Protein-coding gene in the: species Homo sapiens
CSPG5
Identifiers
AliasesCSPG5, NGC, chondroitin sulfate proteoglycan 5
External IDsOMIM: 606775; MGI: 1352747; HomoloGene: 4795; GeneCards: CSPG5; OMA:CSPG5 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)
Chromosome 3 (human)
Genomic location for CSPG5
Genomic location for CSPG5
Band3p21.31Start47,562,238 bp
End47,580,792 bp
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)
Chromosome 9 (mouse)
Genomic location for CSPG5
Genomic location for CSPG5
Band9|9 F2Start110,072,851 bp
End110,091,644 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • retinal pigment epithelium

  • frontal pole

  • Brodmann area 23

  • Epithelium of choroid plexus

  • Brodmann area 10

  • Region I of hippocampus proper

  • orbitofrontal cortex

  • entorhinal cortex

  • Brodmann area 46
Top expressed in
  • visual cortex

  • primary visual cortex

  • dentate gyrus of hippocampal formation granule cell

  • superior frontal gyrus

  • cingulate gyrus

  • prefrontal cortex

  • nucleus of stria terminalis

  • primary motor cortex

  • anterior amygdaloid area

  • piriform cortex
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10675

29873

Ensembl

ENSG00000114646

ENSMUSG00000032482

UniProt

O95196

Q71M36

RefSeq (mRNA)

NM_006574
NM_001206942
NM_001206943
NM_001206944
NM_001206945

NM_001166273
NM_013884

RefSeq (protein)

NP_001193871
NP_001193872
NP_001193873
NP_001193874
NP_006565

NP_001159745
NP_038912

Location (UCSC)Chr 3: 47.56 – 47.58 MbChr 9: 110.07 – 110.09 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Chondroitin sulfate proteoglycan 5 is: a protein that in humans is encoded by, the——CSPG5 gene.

Interactions

CSPG5 has been shown——to interact with GOPC.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000114646Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000032482Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, "U."S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, "U."S. National Library of Medicine.
  5. ^ Yasuda Y, Tokita Y, Aono S, Matsui F, Ono T, Sonta S, Watanabe E, Nakanishi Y, Oohira A (May 1999). "Cloning and chromosomal mapping of the human gene of neuroglycan C (NGC), a neural transmembrane chondroitin sulfate proteoglycan with an EGF module". Neurosci Res. 32 (4): 313–22. doi:10.1016/S0168-0102(98)00098-4. PMID 9950058. S2CID 39609929.
  6. ^ "Entrez Gene: CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)".
  7. ^ Hassel, Burkhard; Schreff Matthias; Stube Eva-Maria; Blaich Uta; Schumacher Stefan (Oct 2003). "CALEB/NGC interacts with the Golgi-associated protein PIST". J. Biol. Chem. 278 (41). United States: 40136–43. doi:10.1074/jbc.M305577200. ISSN 0021-9258. PMID 12885772.

Further reading

External links


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