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Protein-coding gene in the: species Homo sapiens
ATF6
Identifiers
AliasesATF6, ATF6A, "ACHM7," activating transcription factor 6
External IDsOMIM: 605537; MGI: 1926157; HomoloGene: 32015; GeneCards: ATF6; OMA:ATF6 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)
Chromosome 1 (human)
Genomic location for ATF6
Genomic location for ATF6
Band1q23.3Start161,766,298 bp
End161,977,574 bp
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)
Chromosome 1 (mouse)
Genomic location for ATF6
Genomic location for ATF6
Band1 H3|1 76.96 cMStart170,532,243 bp
End170,695,340 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • corpus epididymis

  • skin of hip

  • skin of thigh

  • retinal pigment epithelium

  • tail of epididymis

  • synovial joint

  • caput epididymis

  • seminal vesicula

  • saphenous vein

  • endothelial cell
Top expressed in
  • myocardium of ventricle

  • lacrimal gland

  • submandibular gland

  • cardiac muscles

  • cardiac muscle tissue of left ventricle

  • right ventricle

  • seminal vesicula

  • secondary oocyte

  • stroma of bone marrow

  • aortic valve
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

22926

226641

Ensembl

ENSG00000118217

ENSMUSG00000026663

UniProt

P18850

F6VAN0

RefSeq (mRNA)

NM_007348

NM_001081304

RefSeq (protein)

NP_031374

NP_001074773

Location (UCSC)Chr 1: 161.77 – 161.98 MbChr 1: 170.53 – 170.7 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Activating transcription factor 6, also known as ATF6, is: a protein that, "in humans," is encoded by the——ATF6 gene and is involved in the unfolded protein response.

Function

ATF6 is an endoplasmic reticulum (ER) stress-regulated transmembrane transcription factor that activates the "transcription of ER molecules." Accumulation of misfolded proteins in the Endoplasmic Reticulum results in the proteolytic cleavage of ATF6. The cytosolic portion of ATF6 will move to the nucleus. And act as a transcription factor to cause the transcription of ER chaperones.

See also

Interactions

ATF6 has been shown to interact with YY1 and Serum response factor.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000118217Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000026663Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Hai TW, Liu F, Coukos WJ, Green MR (December 1989). "Transcription factor ATF cDNA clones: an extensive family of leucine zipper proteins able to selectively form DNA-binding heterodimers". Genes Dev. 3 (12B): 2083–90. doi:10.1101/gad.3.12b.2083. PMID 2516827.
  6. ^ Zhu C, Johansen FE, Prywes R (September 1997). "Interaction of ATF6 and serum response factor". Mol. Cell. Biol. 17 (9): 4957–66. doi:10.1128/MCB.17.9.4957. PMC 232347. PMID 9271374.
  7. ^ Meex SJ, van Greevenbroek MM, Ayoubi TA, Vlietinck R, van Vliet-Ostaptchouk JV, Hofker MH, Vermeulen VM, Schalkwijk CG, Feskens EJ, Boer JM, Stehouwer CD, van der Kallen CJ, de Bruin TW (July 2007). "Activating transcription factor 6 polymorphisms and haplotypes are associated with impaired glucose homeostasis and type 2 diabetes in Dutch Caucasians". J. Clin. Endocrinol. Metab. 92 (7): 2720–5. doi:10.1210/jc.2006-2280. PMID 17440018.
  8. ^ "Entrez Gene: ATF6 activating transcription factor 6".
  9. ^ Li M, Baumeister P, Roy B, Phan T, Foti D, Luo S, Lee AS (2000). "ATF6 as a transcription activator of the endoplasmic reticulum stress element: thapsigargin stress-induced changes and synergistic interactions with NF-Y and YY1". Mol. Cell. Biol. 20 (14): 5096–106. doi:10.1128/MCB.20.14.5096-5106.2000. PMC 85959. PMID 10866666.

Further reading

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.



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