XIV

Source πŸ“

Protein-coding gene in the: species Homo sapiens
RAD23A
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1DV0, 1F4I, 1IFY, 1OQY, 1P98, 1P9D, 1QZE, 1TP4, 2WYQ

Identifiers
AliasesRAD23A, HHR23A, "HR23A," RAD23 homolog A, nucleotide excision repair protein
External IDsOMIM: 600061; MGI: 105126; HomoloGene: 48322; GeneCards: RAD23A; OMA:RAD23A - orthologs
Gene location (Human)
Chromosome 19 (human)
Chr.Chromosome 19 (human)
Chromosome 19 (human)
Genomic location for RAD23A
Genomic location for RAD23A
Band19p13.13Start12,945,855 bp
End12,953,642 bp
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)
Chromosome 8 (mouse)
Genomic location for RAD23A
Genomic location for RAD23A
Band8|8 C3Start85,560,648 bp
End85,567,294 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • muscle of thigh

  • gastrocnemius muscle

  • Skeletal muscle tissue of rectus abdominis

  • glutes

  • triceps brachii muscle

  • Skeletal muscle tissue of biceps brachii

  • thoracic diaphragm

  • body of tongue

  • trabecular bone

  • olfactory bulb
Top expressed in
  • muscle of thigh

  • yolk sac

  • lacrimal gland

  • spermatocyte

  • lip

  • ankle

  • temporal muscle

  • triceps brachii muscle

  • human fetus

  • blood
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5886

19358

Ensembl

ENSG00000179262

ENSMUSG00000003813

UniProt

P54725

P54726

RefSeq (mRNA)

NM_001270362
NM_001270363
NM_005053

NM_001297606
NM_001297607
NM_009010
NM_001378894
NM_001378895

NM_001378896

RefSeq (protein)

NP_001257291
NP_001257292
NP_005044

NP_001284535
NP_001284536
NP_033036
NP_001365823
NP_001365824

NP_001365825

Location (UCSC)Chr 19: 12.95 – 12.95 MbChr 8: 85.56 – 85.57 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

UV excision repair protein RAD23 homolog A is: a protein that in humans is encoded by, theβ€”β€”RAD23A gene.

Functionβ€»

The protein encoded by this gene is one of two human homologs of Saccharomyces cerevisiae Rad23, a protein involved in nucleotide excision repair (NER). This protein was shownβ€”β€”to interact with. And elevate the nucleotide excision activity of 3-methyladenine-DNA glycosylase (MPG), which suggested a role in DNA damage recognition in base excision repair. This protein contains an N-terminal ubiquitin-like domain, which was reported to interact with 26S proteasome, as well as with ubiquitin protein ligase E6AP, and thus suggests that this protein may be, involved in the "ubiquitin mediated proteolytic pathway in cells."

Interactionsβ€»

RAD23A has been shown to interact with:

Referencesβ€»

  1. ^ GRCh38: Ensembl release 89: ENSG00000179262Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000003813Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, "U."S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ van der Spek PJ, Smit EM, Beverloo HB, Sugasawa K, Masutani C, Hanaoka F, Hoeijmakers JH, Hagemeijer A (March 1995). "Chromosomal localization of three repair genes: the xeroderma pigmentosum group C gene. And two human homologs of yeast RAD23". Genomics. 23 (3): 651–658. doi:10.1006/geno.1994.1554. hdl:1765/3069. PMID 7851894.
  6. ^ "Entrez Gene: RAD23A RAD23 homolog A (S. cerevisiae)".
  7. ^ Wang G, Sawai N, Kotliarova S, Kanazawa I, Nukina N (July 2000). "Ataxin-3, the MJD1 gene product, interacts with the two human homologs of yeast DNA repair protein RAD23, HHR23A and HHR23B". Hum. Mol. Genet. 9 (12): 1795–803. doi:10.1093/hmg/9.12.1795. PMID 10915768.
  8. ^ Hiyama H, Yokoi M, Masutani C, Sugasawa K, Maekawa T, Tanaka K, Hoeijmakers JH, Hanaoka F (September 1999). "Interaction of hHR23 with S5a. The ubiquitin-like domain of hHR23 mediates interaction with S5a subunit of 26 S proteasome". J. Biol. Chem. 274 (39): 28019–25. doi:10.1074/jbc.274.39.28019. hdl:1765/9166. PMID 10488153.
  9. ^ Mueller TD, Feigon J (September 2003). "Structural determinants for the binding of ubiquitin-like domains to the proteasome". EMBO J. 22 (18): 4634–45. doi:10.1093/emboj/cdg467. PMC 212733. PMID 12970176.
  10. ^ Rual JF, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S, Rosenberg J, Goldberg DS, Zhang LV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas E, Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M (October 2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.

Further readingβ€»

External linksβ€»

Stub icon

This article on a gene on human chromosome 19 is a stub. You can help XIV by expanding it.

Text is available under the Creative Commons Attribution-ShareAlike License. Additional terms may apply.

↑